Here's a couple of links to Ford gearbox conversions, the Revington Ford conversion is based upon a UK design (possibly the one in the next link, and I think that their Toyota conversion is Australian.
http://www.revingtontr.com/shop/collection_display.asp?cartype=tr3&cid=969http://hi-gearengineering.co.uk/Both are intended for the TR range so would involve some frame surgery which is the main reason I decided to leave mine as it is!
Similar comments apply to the overdrive option but the links on GoMog are helpful in deciphering Moss boxes and compatability.
I had a link to what looked like a very nice T5 conversion which I can't find right now but it appeared to retain the bell housing and torque tube and just replace the Moss box with a T5 which I understand is something that Jaguar owners sometimes do.